OxCalculatorT1WithSignCheck.h

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#ifndef Tomato_OXCALCULATORT1WithSignCheck_H
#define Tomato_OXCALCULATORT1WithSignCheck_H

#include "OxCalculator.h"
#include "tomatolib_export.h"

namespace Ox {

    template< typename MeasureType >
    class CalculatorT1WithSignCheck : public Calculator<MeasureType> {
    public:

        virtual int calculate();

        virtual int prepareToCalculate();

        virtual std::map <std::string, MeasureType> calculateWithSignCheck(int nSamples, const MeasureType* invTimes, MeasureType* signal, MeasureType* signs);

        MeasureType calculateR2FromModel(int nSamples, const MeasureType* invTimes, const MeasureType* signal, const MeasureType* parameters);

        MeasureType calculateR2AbsFromModel(int nSamples, const MeasureType* invTimes, const MeasureType* signal, const MeasureType* parameters);

        bool getDoCalculateSDMap() const;


        const MeasureType * getInvTimes() const;

        void setDoCalculateSDMap(bool _DoCalculateSDMap);

        CalculatorT1WithSignCheck() : Calculator<MeasureType>(){
            MaxTIForSignInvert = this->MAX_T1_TRESHOLD * 0.67;
            _DoCalculateSDMap = false;
        }

        virtual Calculator<MeasureType> *newByCloning() { return new CalculatorT1WithSignCheck<MeasureType>(*this); }

    protected:

        const static int MAX_T1_TRESHOLD = 4000;

        double MaxTIForSignInvert;
        bool _DoCalculateSDMap;

    };

} //namespace Ox

#ifndef TOMATOLIB_COMPILED
#include "OxCalculatorT1WithSignCheck.hxx"
#endif //TOMATOLIB_COMPILED

#endif //Tomato_OXCALCULATORT1WithSignCheck_H